Computational Challenges of Tumor Spheroid Modeling
نویسندگان
چکیده
The speed and the versatility of today's computers open up new opportunities to simulate complex biological systems. Here we review a computational approach recently proposed by us to model large tumor cell populations and spheroids, and we put forward general considerations that apply to any fine-grained numerical model of tumors. We discuss ways to bypass computational limitations and discuss our incremental approach, where each step is validated by experimental observations on a quantitative basis. We present a few results on the growth of tumor cells in closed and open environments and of tumor spheroids. This study suggests new ways to explore the initial growth phase of solid tumors and to optimize antitumor treatments.
منابع مشابه
Design and performance evaluation of spheroid geometry for brain PET scanner using Monte Carlo modeling
Introduction: There has been a curiosity about the spheroid geometry for PET scanners developments since several years ago, therefore in this study, we are aiming to evaluate the performance of this geometry and compare its performance with cylindrical geometry using Monte Carlo simulation. Methods: We simulated a spheroid geometry with a radius of 199 mm...
متن کاملComparison of radiosensitizing effect of Resveratrol on monolayer and spheroid culture of DU145 prostatic cell line
Background: Radiotherapy is an established therapeutic modality for prostate cancer. Resveratrol, a natural antioxidant, has been shown to inhibit carcinogenesis and to block the process of tumor initiation and progression. No data is available on the response of cellular spheroid to Reseveratol. In this study we have examined the effect of Resveratol on the radiation response of human p...
متن کاملReduced DNA damage in tumor spheroids compared to monolayer cultures exposed to ionizing radiation
Background: Several cell lines when cultured under proper condition can form three dimensional structures called multicellular tumor spheroids. Tumor spheroids are valuable in vitro models for studying physical and biological behavior of real tumors. A number of previous studies using a variety of techniques have shown no relationship between radiosensitivity and DNA strand breaks in monolayer ...
متن کاملModeling Vascular Tumor Growth
We have enhanced a computational tumor model developed at the Los Alamos National Laboratory (LANL). We have modified portions of the model in order to accommodate the inclusion of vasculature (a blood-vessel system). Other modifications were made which allow chemotherapy treatments which are not cell cycle specific to be simulated. We have worked to increase the efficiency of the model code, r...
متن کاملThe role of Rad51 protein in radioresistance of spheroid model of DU145 prostate carcinoma cell line
Background: Rad51 is a protein with critical role in double strand break repair. Down-regulation of this protein has a significant effect in radiosensitivity of some cell lines like prostate carcinoma. Compared to monolayer cell culture model, the spheroids are more resistant to radiation. The aim of the current study was to determine the Rad51 protein level in DU145 spheroids, and monol...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
- Journal of bioinformatics and computational biology
دوره 9 4 شماره
صفحات -
تاریخ انتشار 2011